rna_cleaner Namespace Reference

Functions
def	font_bold
def	usage
def	help
def	check_commandline
def	check_prefix
def	check_if_changed
def	get_props_from_txt
def	get_props_from_py
def	get_props
def	sort
def	file_basename
def	write_files
def	main

---

Function Documentation

def rna_cleaner::check_commandline

(

)

Takes parameters from the commandline.

Definition at line 53 of file rna_cleaner.py.

def rna_cleaner::check_if_changed	(		a,
			b
	)

Definition at line 96 of file rna_cleaner.py.

def rna_cleaner::check_prefix	(		prop,
			btype
	)

Definition at line 79 of file rna_cleaner.py.

def rna_cleaner::file_basename

(

input_filename

)

Definition at line 229 of file rna_cleaner.py.

def rna_cleaner::font_bold

(

mystring

)

Formats the string as bold, to be used in printouts.

Definition at line 15 of file rna_cleaner.py.

def rna_cleaner::get_props

(

input_filename

)

Definition at line 201 of file rna_cleaner.py.

def rna_cleaner::get_props_from_py

(

input_filename

)

If the file is *.py, the script assumes it contains a python list (as "rna_api=[...]")
This means that this script executes the text in the py file with an exec(text).

Definition at line 180 of file rna_cleaner.py.

def rna_cleaner::get_props_from_txt

(

input_filename

)

If the file is *.txt, the script assumes it is formatted as outlined in this script docstring

Definition at line 101 of file rna_cleaner.py.

def rna_cleaner::help

(

)

Prints script' help.

Definition at line 38 of file rna_cleaner.py.

Referenced by options_parse().

def rna_cleaner::main

(

)

Definition at line 296 of file rna_cleaner.py.

def rna_cleaner::sort	(		props_list,
			sort_priority
	)

reminder
props=[comment, changed, bclass, bfrom, bto, kwcheck, btype, description]

Definition at line 209 of file rna_cleaner.py.

def rna_cleaner::usage

(

)

Prints script usage.

Definition at line 24 of file rna_cleaner.py.

def rna_cleaner::write_files	(		basename,
			props_list,
			props_length_max
	)

Writes in 3 files:
  * output_filename_work.txt: formatted as txt input file (can be edited)
  * output_filename_work.py:  formatted for readability (can be edited)
  * rna_api.py: unformatted, just as final output

Definition at line 245 of file rna_cleaner.py.